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STBD1 starch binding domain 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117022554, updated on 30-Mar-2024

Summary

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Gene symbol
STBD1
Gene description
starch binding domain 1
See related
EnsemblRapid:ENSRFEG00010021110
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See STBD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 5 NC_046288.1 (32611976..32615282)

Chromosome 5 - NC_046288.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene scavenger receptor class B member 2 Neighboring gene histone acetyltransferase type B catalytic subunit-like Neighboring gene family with sequence similarity 47 member E Neighboring gene U6 spliceosomal RNA Neighboring gene coiled-coil domain containing 158 Neighboring gene ubiquitin-60S ribosomal protein L40-like Neighboring gene shroom family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046288.1 Chromosome 5 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046288.1 Reference mRhiFer1_v1.p

    Range
    32611976..32615282
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033106681.1 → XP_032962572.1  starch-binding domain-containing protein 1

    UniProtKB/TrEMBL
    A0A671G7R8
    Related
    ENSRFEP00010031948.1, ENSRFET00010034631.2
    Conserved Domains (1) summary
    cd05813
    Location:262 → 356
    CBM20_genethonin_1; Genethonin-1, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Genethonin-1 is a human skeletal muscle protein with no known function. It contains a C-terminal CBM20 domain. The CBM20 domain is found in a large number of starch ...
Nucleotide Protein
Heading Accession and Version

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