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GRSF1 G-rich RNA sequence binding factor 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117022257, updated on 30-Mar-2024

Summary

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Gene symbol
GRSF1
Gene description
G-rich RNA sequence binding factor 1
See related
EnsemblRapid:ENSRFEG00010017588
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GRSF1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 5 NC_046288.1 (28655342..28673381, complement)

Chromosome 5 - NC_046288.1Genomic Context describing neighboring genes Neighboring gene UTP3 small subunit processome component Neighboring gene RUN and FYVE domain containing 3 Neighboring gene centriole, cilia and spindle-associated protein-like Neighboring gene MOB kinase activator 1B Neighboring gene U6 spliceosomal RNA Neighboring gene deoxycytidine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046288.1 Chromosome 5 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-rich sequence factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046288.1 Reference mRhiFer1_v1.p

    Range
    28655342..28673381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033106208.1 → XP_032962099.1  G-rich sequence factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A671FLF9, A0A7J7ZCH3
    Related
    ENSRFEP00010026471.1, ENSRFET00010028765.2
    Conserved Domains (3) summary
    cd12505
    Location:248 → 324
    RRM2_GRSF1; RNA recognition motif 2 (RRM2) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12730
    Location:148 → 226
    RRM1_GRSF1; RNA recognition motif 1 (RRM1) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12733
    Location:400 → 474
    RRM3_GRSF1; RNA recognition motif 3 (RRM3) found in G-rich sequence factor 1 (GRSF-1) and similar proteins

  2. XM_033106209.1 → XP_032962100.1  G-rich sequence factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A7J7ZCH3
    Conserved Domains (3) summary
    cd12505
    Location:197 → 273
    RRM2_GRSF1; RNA recognition motif 2 (RRM2) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12730
    Location:97 → 175
    RRM1_GRSF1; RNA recognition motif 1 (RRM1) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12733
    Location:349 → 423
    RRM3_GRSF1; RNA recognition motif 3 (RRM3) found in G-rich sequence factor 1 (GRSF-1) and similar proteins

  3. XM_033106210.1 → XP_032962101.1  G-rich sequence factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A7J7ZCH3
    Conserved Domains (3) summary
    cd12505
    Location:194 → 270
    RRM2_GRSF1; RNA recognition motif 2 (RRM2) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12730
    Location:94 → 172
    RRM1_GRSF1; RNA recognition motif 1 (RRM1) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12733
    Location:346 → 420
    RRM3_GRSF1; RNA recognition motif 3 (RRM3) found in G-rich sequence factor 1 (GRSF-1) and similar proteins

  4. XM_033106211.1 → XP_032962102.1  G-rich sequence factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A7J7ZCH3, A0A7J7ZCW9
    Conserved Domains (3) summary
    cd12505
    Location:131 → 207
    RRM2_GRSF1; RNA recognition motif 2 (RRM2) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12730
    Location:31 → 109
    RRM1_GRSF1; RNA recognition motif 1 (RRM1) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12733
    Location:283 → 357
    RRM3_GRSF1; RNA recognition motif 3 (RRM3) found in G-rich sequence factor 1 (GRSF-1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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