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HMGCLL1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117020867, updated on 11-Apr-2024

Summary

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Gene symbol
HMGCLL1
Gene description
3-hydroxy-3-methylglutaryl-CoA lyase like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See HMGCLL1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 3 NC_046286.1 (22604979..22747437, complement)

Chromosome 3 - NC_046286.1Genomic Context describing neighboring genes Neighboring gene hypocretin receptor 2 Neighboring gene U6 spliceosomal RNA Neighboring gene GDNF family receptor alpha like Neighboring gene bone morphogenetic protein 5 Neighboring gene U8 small nucleolar RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046286.1 Chromosome 3 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic
Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase L1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046286.1 Reference mRhiFer1_v1.p

    Range
    22604979..22747437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033103643.1 → XP_032959534.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A671E4J7
    Conserved Domains (1) summary
    cl21457
    Location:41 → 304
    TIM; TIM-like beta/alpha barrel domains

  2. XM_033103642.1 → XP_032959533.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A671E527
    Conserved Domains (1) summary
    cl21457
    Location:41 → 336
    TIM; TIM-like beta/alpha barrel domains
Nucleotide Protein
Heading Accession and Version

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