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LMAN2L lectin, mannose binding 2 like [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117019301, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
See related
EnsemblRapid:ENSRFEG00010018703
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 13 Unlocalized Scaffold NW_022680356.1 (2193699..2217436, complement)

NW_022680356.1Genomic Context describing neighboring genes Neighboring gene KAT8 regulatory NSL complex subunit 3 Neighboring gene fer-1 like family member 5 Neighboring gene U6 spliceosomal RNA Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022680356 Chromosome 13 Unlocalized Scaffold Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NW_022680356.1 Reference mRhiFer1_v1.p

    Range
    2193699..2217436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033100919.1 → XP_032956810.1  VIP36-like protein isoform X4

    UniProtKB/TrEMBL
    A0A7J7R2V5
    Related
    ENSRFEP00010050213.1, ENSRFET00010062747.1
    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  2. XM_033100918.1 → XP_032956809.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A7J7R306
    Related
    ENSRFEP00010045040.1, ENSRFET00010046566.1
    Conserved Domains (1) summary
    cl14058
    Location:35 → 164
    lectin_L-type; legume lectins

  3. XM_033100917.1 → XP_032956808.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A671FR82, A0A7J7R2Q7
    Related
    ENSRFEP00010028177.1, ENSRFET00010030584.2
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  4. XM_033100916.1 → XP_032956807.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A671FQZ6, A0A7J7R2Q8
    Related
    ENSRFEP00010028168.1, ENSRFET00010030573.2
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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