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ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117019098, updated on 30-Mar-2024

Summary

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Gene symbol
ST8SIA6
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
See related
EnsemblRapid:ENSRFEG00010021356
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See ST8SIA6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 5 Unlocalized Scaffold NW_022680355.1 (3335455..3472907, complement)

NW_022680355.1Genomic Context describing neighboring genes Neighboring gene tRNA aspartic acid methyltransferase 1 Neighboring gene ATP synthase subunit O, mitochondrial-like Neighboring gene vimentin Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene signal transducing adaptor molecule

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022680355 Chromosome 5 Unlocalized Scaffold Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NW_022680355.1 Reference mRhiFer1_v1.p

    Range
    3335455..3472907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033100517.1 → XP_032956408.1  alpha-2,8-sialyltransferase 8F

    UniProtKB/TrEMBL
    A0A671G3C8
    Related
    ENSRFEP00010038790.1, ENSRFET00010046390.1
    Conserved Domains (1) summary
    pfam00777
    Location:136 → 389
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_033100516.1 → XP_032956407.1  alpha-2,8-sialyltransferase 8F

    UniProtKB/TrEMBL
    A0A671G3C8
    Related
    ENSRFEP00010032380.1, ENSRFET00010035087.2
    Conserved Domains (1) summary
    pfam00777
    Location:136 → 389
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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