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MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117018161, updated on 30-Mar-2024

Summary

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Gene symbol
MDGA1
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 1
See related
EnsemblRapid:ENSRFEG00010000794
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See MDGA1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 3 NC_046286.1 (7665072..7725082, complement)

Chromosome 3 - NC_046286.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S29-like Neighboring gene 60S acidic ribosomal protein P0-like Neighboring gene cytochrome c oxidase subunit 6C Neighboring gene zinc finger AN1-type containing 3 Neighboring gene RWD domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046286.1 Chromosome 3 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046286.1 Reference mRhiFer1_v1.p

    Range
    7665072..7725082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033098992.1 → XP_032954883.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1

    UniProtKB/TrEMBL
    A0A671DNE8, A0A7J7YSF7
    Related
    ENSRFEP00010001010.1, ENSRFET00010001132.2
    Conserved Domains (5) summary
    smart00410
    Location:248 → 326
    IG_like; Immunoglobulin like
    pfam00629
    Location:753 → 917
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:439 → 515
    Ig_3; Immunoglobulin domain
    cd00096
    Location:56 → 60
    Ig; Ig strand B [structural motif]
    cl11960
    Location:44 → 115
    Ig; Immunoglobulin domain
Nucleotide Protein
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