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SPAM1 sperm adhesion molecule 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117018077, updated on 30-Mar-2024

Summary

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Gene symbol
SPAM1
Gene description
sperm adhesion molecule 1
See related
EnsemblRapid:ENSRFEG00010014812
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human all
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Genomic context

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See SPAM1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 26 NC_046309.1 (20661674..20680658, complement)

Chromosome 26 - NC_046309.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 229A Neighboring gene repressor of RNA polymerase III transcription MAF1 homolog Neighboring gene hyaluronidase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046309.1 Chromosome 26 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase PH-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046309.1 Reference mRhiFer1_v1.p

    Range
    20661674..20680658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033098820.1 → XP_032954711.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A671F8K1
    Related
    ENSRFEP00010022061.2, ENSRFET00010024005.2
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 368
    Glyco_hydro_56; Hyaluronidase
Nucleotide Protein
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