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PTPRN2 protein tyrosine phosphatase receptor type N2 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117018052, updated on 30-Mar-2024

Summary

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Gene symbol
PTPRN2
Gene description
protein tyrosine phosphatase receptor type N2
See related
EnsemblRapid:ENSRFEG00010015454
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See PTPRN2 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 26 NC_046309.1 (276362..704184)

Chromosome 26 - NC_046309.1Genomic Context describing neighboring genes Neighboring gene non-SMC condensin II complex subunit G2 Neighboring gene uncharacterized LOC117018053 Neighboring gene DnaJ heat shock protein family (Hsp40) member B6 Neighboring gene uncharacterized LOC117018223

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046309.1 Chromosome 26 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase N2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046309.1 Reference mRhiFer1_v1.p

    Range
    276362..704184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033098764.1 → XP_032954655.1  receptor-type tyrosine-protein phosphatase N2 isoform X1

    UniProtKB/TrEMBL
    A0A671FKJ9, A0A7J7RJ82
    Related
    ENSRFEP00010023043.1, ENSRFET00010025068.2
    Conserved Domains (3) summary
    cd14610
    Location:729 → 1011
    R-PTP-N2; PTP-like domain of receptor-type tyrosine-protein phosphatase N2
    pfam11548
    Location:511 → 599
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    pfam14948
    Location:75 → 129
    RESP18; RESP18 domain

  2. XM_033098765.1 → XP_032954656.1  receptor-type tyrosine-protein phosphatase N2 isoform X2

    UniProtKB/TrEMBL
    A0A671FKN5, A0A7J7RJQ4
    Related
    ENSRFEP00010023093.1, ENSRFET00010025122.2
    Conserved Domains (3) summary
    cd14610
    Location:658 → 940
    R-PTP-N2; PTP-like domain of receptor-type tyrosine-protein phosphatase N2
    pfam11548
    Location:511 → 598
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    pfam14948
    Location:75 → 129
    RESP18; RESP18 domain
Nucleotide Protein
Heading Accession and Version

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