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GALNT9 polypeptide N-acetylgalactosaminyltransferase 9 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117017639, updated on 30-Mar-2024

Summary

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Gene symbol
GALNT9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
See related
EnsemblRapid:ENSRFEG00010016787
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GALNT9 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 25 NC_046308.1 (457057..513832)

Chromosome 25 - NC_046308.1Genomic Context describing neighboring genes Neighboring gene leucine rich colipase like 1 Neighboring gene fibrosin like 1 Neighboring gene uncharacterized LOC117017640 Neighboring gene nucleolar complex associated 4 homolog Neighboring gene DEAD-box helicase 51

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046308.1 Chromosome 25 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046308.1 Reference mRhiFer1_v1.p

    Range
    457057..513832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033098089.1 → XP_032953980.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X4

    UniProtKB/TrEMBL
    A0A671FHZ3
    Related
    ENSRFEP00010025196.1, ENSRFET00010027383.2
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 564
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_033098087.1 → XP_032953978.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A671FI09, A0A7J7RPP1
    Related
    ENSRFEP00010025288.2, ENSRFET00010027483.2
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 558
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_033098088.1 → XP_032953979.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X3

    UniProtKB/TrEMBL
    A0A671FI09, A0A671FS61
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_033098086.1 → XP_032953977.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A671FI09
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 556
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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