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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117017620, updated on 30-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
See related
EnsemblRapid:ENSRFEG00010010202
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 25 NC_046308.1 (26647872..27211637, complement)

Chromosome 25 - NC_046308.1Genomic Context describing neighboring genes Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger Neighboring gene uncharacterized LOC117017852 Neighboring gene 40S ribosomal protein S6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046308.1 Chromosome 25 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046308.1 Reference mRhiFer1_v1.p

    Range
    26647872..27211637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033098048.1 → XP_032953939.1  kin of IRRE-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A671EPN3
    Related
    ENSRFEP00010015384.2, ENSRFET00010016796.2
    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain

  2. XM_033098046.1 → XP_032953937.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671EQ90, A0A671EYH8
    Related
    ENSRFEP00010015295.1, ENSRFET00010016700.2
    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain

  3. XM_033098047.1 → XP_032953938.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A671EPK1, A0A7J7RPE4
    Related
    ENSRFEP00010015349.2, ENSRFET00010016761.2
    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain
Nucleotide Protein
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