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MTMR3 myotubularin related protein 3 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117017455, updated on 30-Mar-2024

Summary

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Gene symbol
MTMR3
Gene description
myotubularin related protein 3
See related
EnsemblRapid:ENSRFEG00010006790
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See MTMR3 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 25 NC_046308.1 (19164828..19292580)

Chromosome 25 - NC_046308.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 9 Neighboring gene activating signal cointegrator 1 complex subunit 2 Neighboring gene NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like Neighboring gene uncharacterized LOC117017460 Neighboring gene double homeobox protein A-like Neighboring gene HORMA domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046308.1 Chromosome 25 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046308.1 Reference mRhiFer1_v1.p

    Range
    19164828..19292580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033097667.1 → XP_032953558.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  2. XM_033097668.1 → XP_032953559.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  3. XM_033097666.1 → XP_032953557.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Related
    ENSRFEP00010010031.1, ENSRFET00010010966.2
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  4. XM_033097669.1 → XP_032953560.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  5. XM_033097665.1 → XP_032953556.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  6. XM_033097673.1 → XP_032953564.1  myotubularin-related protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A671EEG6
    Related
    ENSRFEP00010010128.2, ENSRFET00010011076.2
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1084 → 1153
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  7. XM_033097672.1 → XP_032953563.1  myotubularin-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A671EEG6, A0A671EHZ9
    Related
    ENSRFEP00010010187.2, ENSRFET00010011142.2
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1181
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  8. XM_033097674.1 → XP_032953565.1  myotubularin-related protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A671EEG6, A0A7J7RPY2
    Related
    ENSRFEP00010010077.2, ENSRFET00010011018.2
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1084 → 1144
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  9. XM_033097670.1 → XP_032953561.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3

  10. XM_033097671.1 → XP_032953562.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A671E9V0, A0A671EEG6
    Conserved Domains (3) summary
    cd13341
    Location:23 → 116
    PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cd15732
    Location:1121 → 1190
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
Nucleotide Protein
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