U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SDC4 syndecan 4 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117015853, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SDC4
Gene description
syndecan 4
See related
EnsemblRapid:ENSRFEG00010020108
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SDC4 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 23 NC_046306.1 (12575388..12593971)

Chromosome 23 - NC_046306.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L15-like Neighboring gene SYS1 golgi trafficking protein Neighboring gene recombination signal binding protein for immunoglobulin kappa J region like Neighboring gene matrilin 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_046306.1 Chromosome 23 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
syndecan-4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046306.1 Reference mRhiFer1_v1.p

    Range
    12575388..12593971
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033094654.1 → XP_032950545.1  syndecan-4

    UniProtKB/TrEMBL
    A0A671G6B1
    Related
    ENSRFEP00010030332.1, ENSRFET00010032898.2
    Conserved Domains (1) summary
    pfam01034
    Location:144 → 201
    Syndecan; Syndecan domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.