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GYG1 glycogenin 1 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117014325, updated on 30-Mar-2024

Summary

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Gene symbol
GYG1
Gene description
glycogenin 1
See related
EnsemblRapid:ENSRFEG00010005772
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See GYG1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 2 NC_046285.1 (8176365..8212325)

Chromosome 2 - NC_046285.1Genomic Context describing neighboring genes Neighboring gene histone H2A.Z-like Neighboring gene olfactory receptor 5AC1-like Neighboring gene helicase like transcription factor Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene ceruloplasmin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046285.1 Chromosome 2 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046285.1 Reference mRhiFer1_v1.p

    Range
    8176365..8212325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033092044.1 → XP_032947935.1  glycogenin-1 isoform X1

    UniProtKB/TrEMBL
    A0A671E4Z2
    Related
    ENSRFEP00010008444.1, ENSRFET00010009284.2
    Conserved Domains (1) summary
    cd02537
    Location:4 → 256
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_033092053.1 → XP_032947944.1  glycogenin-1 isoform X2

    UniProtKB/TrEMBL
    A0A671E517
    Related
    ENSRFEP00010008469.2, ENSRFET00010009310.2
    Conserved Domains (1) summary
    cd02537
    Location:4 → 256
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  3. XM_033092062.1 → XP_032947953.1  glycogenin-1 isoform X3

    Conserved Domains (1) summary
    cd02537
    Location:1 → 210
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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