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PLA2G4A phospholipase A2 group IVA [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117014282, updated on 30-Mar-2024

Summary

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Gene symbol
PLA2G4A
Gene description
phospholipase A2 group IVA
See related
EnsemblRapid:ENSRFEG00010013298
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See PLA2G4A in Genome Data Viewer
Location:
chromosome: 22
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 22 NC_046305.1 (17431989..17571356)

Chromosome 22 - NC_046305.1Genomic Context describing neighboring genes Neighboring gene phosducin Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L4-like Neighboring gene potassium two pore domain channel subfamily K member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046305.1 Chromosome 22 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046305.1 Reference mRhiFer1_v1.p

    Range
    17431989..17571356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033091978.1 → XP_032947869.1  cytosolic phospholipase A2

    UniProtKB/TrEMBL
    A0A671F2H1, A0A7J7SYF9
    Related
    ENSRFEP00010041776.1, ENSRFET00010052078.1
    Conserved Domains (2) summary
    cd07200
    Location:144 → 730
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 138
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
Nucleotide Protein
Heading Accession and Version

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