U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SGCA sarcoglycan alpha [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117014084, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SGCA
Gene description
sarcoglycan alpha
See related
EnsemblRapid:ENSRFEG00010021307
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SGCA in Genome Data Viewer
Location:
chromosome: 21
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 21 NC_046304.1 (33313939..33324354, complement)

Chromosome 21 - NC_046304.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 92 Neighboring gene collagen type I alpha 1 chain Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene sterile alpha motif domain containing 14

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_046304.1 Chromosome 21 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046304.1 Reference mRhiFer1_v1.p

    Range
    33313939..33324354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033091869.1 → XP_032947760.1  alpha-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A671G8G0
    Related
    ENSRFEP00010034016.1, ENSRFET00010038482.1
    Conserved Domains (1) summary
    pfam05510
    Location:27 → 355
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_033091868.1 → XP_032947759.1  alpha-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A671G8G0
    Conserved Domains (1) summary
    pfam05510
    Location:27 → 355
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  3. XM_033091870.1 → XP_032947761.1  alpha-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A671G8G0, A0A7J7TGK5
    Related
    ENSRFEP00010043661.1, ENSRFET00010039790.1
    Conserved Domains (1) summary
    pfam05510
    Location:27 → 347
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  4. XM_033091871.1 → XP_032947762.1  alpha-sarcoglycan isoform X3

    UniProtKB/TrEMBL
    A0A671G8G0
    Conserved Domains (1) summary
    pfam05510
    Location:16 → 344
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.