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SPACA3 sperm acrosome associated 3 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117013925, updated on 30-Mar-2024

Summary

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Gene symbol
SPACA3
Gene description
sperm acrosome associated 3
See related
EnsemblRapid:ENSRFEG00010019589
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See SPACA3 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 21 NC_046304.1 (21203788..21207849)

Chromosome 21 - NC_046304.1Genomic Context describing neighboring genes Neighboring gene myosin ID Neighboring gene histone H2B Neighboring gene transmembrane protein 98 Neighboring gene acid sensing ion channel subunit 2 Neighboring gene peptidyl-prolyl cis-trans isomerase A Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046304.1 Chromosome 21 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm flagellum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm acrosome membrane-associated protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046304.1 Reference mRhiFer1_v1.p

    Range
    21203788..21207849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033091502.1 → XP_032947393.1  sperm acrosome membrane-associated protein 3

    UniProtKB/TrEMBL
    A0A671FVB9, A0A7J7TG46
    Related
    ENSRFEP00010029545.2, ENSRFET00010032063.2
    Conserved Domains (1) summary
    cd16897
    Location:36 → 161
    LYZ_C; C-type lysozyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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