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PIGL phosphatidylinositol glycan anchor biosynthesis class L [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117013486, updated on 30-Mar-2024

Summary

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Gene symbol
PIGL
Gene description
phosphatidylinositol glycan anchor biosynthesis class L
See related
EnsemblRapid:ENSRFEG00010011806
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See PIGL in Genome Data Viewer
Location:
chromosome: 21
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 21 NC_046304.1 (4045183..4105970)

Chromosome 21 - NC_046304.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor corepressor 1 Neighboring gene nucleophosmin-like Neighboring gene 40S ribosomal protein S15a-like Neighboring gene AP-2 complex subunit beta-like Neighboring gene centromere protein V Neighboring gene uncharacterized LOC117013761

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046304.1 Chromosome 21 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosaminylphosphatidylinositol deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046304.1 Reference mRhiFer1_v1.p

    Range
    4045183..4105970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033090689.1 → XP_032946580.1  N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform X1

    UniProtKB/TrEMBL
    A0A671EWR6, A0A671EWT5
    Related
    ENSRFEP00010044597.1, ENSRFET00010061346.1
    Conserved Domains (1) summary
    COG2120
    Location:37 → 252
    LmbE; N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism]

  2. XM_033090690.1 → XP_032946581.1  N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform X2

    Conserved Domains (1) summary
    COG2120
    Location:37 → 206
    LmbE; N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism]

RNA

  1. XR_004421340.1 RNA Sequence

  2. XR_004421341.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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