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MALT1 MALT1 paracaspase [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117011761, updated on 30-Mar-2024

Summary

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Gene symbol
MALT1
Gene description
MALT1 paracaspase
See related
EnsemblRapid:ENSRFEG00010010969
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See MALT1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 19 NC_046302.1 (47380836..47431267)

Chromosome 19 - NC_046302.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117038722 Neighboring gene alpha kinase 2 Neighboring gene uncharacterized LOC117011762 Neighboring gene zinc finger protein 532 Neighboring gene O-acyltransferase like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046302.1 Chromosome 19 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mucosa-associated lymphoid tissue lymphoma translocation protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046302.1 Reference mRhiFer1_v1.p

    Range
    47380836..47431267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033087440.1 → XP_032943331.1  mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A671EZ51, A0A7J7TQD2
    Related
    ENSRFEP00010016823.1, ENSRFET00010018347.2
    Conserved Domains (5) summary
    cd08783
    Location:52 → 148
    Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
    pfam00656
    Location:368 → 585
    Peptidase_C14; Caspase domain
    pfam13927
    Location:146 → 216
    Ig_3; Immunoglobulin domain
    pfam18703
    Location:608 → 744
    MALT1_Ig; MALT1 Ig-like domain
    cd00096
    Location:166 → 170
    Ig; Ig strand B [structural motif]

  2. XM_033087441.1 → XP_032943332.1  mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A671EZA2, A0A7J7TQD2
    Related
    ENSRFEP00010016873.1, ENSRFET00010018401.2
    Conserved Domains (5) summary
    cd08783
    Location:52 → 148
    Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
    pfam00656
    Location:357 → 574
    Peptidase_C14; Caspase domain
    pfam13927
    Location:146 → 216
    Ig_3; Immunoglobulin domain
    pfam18703
    Location:597 → 733
    MALT1_Ig; MALT1 Ig-like domain
    cd00096
    Location:166 → 170
    Ig; Ig strand B [structural motif]
Nucleotide Protein
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