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DSEL dermatan sulfate epimerase like [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117011720, updated on 30-Mar-2024

Summary

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Gene symbol
DSEL
Gene description
dermatan sulfate epimerase like
See related
EnsemblRapid:ENSRFEG00010017584
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See DSEL in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 19 NC_046302.1 (53032320..53094531, complement)

Chromosome 19 - NC_046302.1Genomic Context describing neighboring genes Neighboring gene cadherin 7 Neighboring gene cadherin 19 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC117012007 Neighboring gene RNA transcription, translation and transport factor protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046302.1 Chromosome 19 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046302.1 Reference mRhiFer1_v1.p

    Range
    53032320..53094531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033087316.1 → XP_032943207.1  dermatan-sulfate epimerase-like protein

    UniProtKB/TrEMBL
    A0A671FV73

  2. XM_033087314.1 → XP_032943205.1  dermatan-sulfate epimerase-like protein

    UniProtKB/TrEMBL
    A0A671FV73
    Related
    ENSRFEP00010026418.1, ENSRFET00010028705.2

  3. XM_033087315.1 → XP_032943206.1  dermatan-sulfate epimerase-like protein

    UniProtKB/TrEMBL
    A0A671FV73
    Related
    ENSRFEP00010036423.1, ENSRFET00010060419.1

  4. XM_033087313.1 → XP_032943204.1  dermatan-sulfate epimerase-like protein

    UniProtKB/TrEMBL
    A0A671FV73
    Related
    ENSRFEP00010047265.1, ENSRFET00010058551.1
Nucleotide Protein
Heading Accession and Version

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