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APOD apolipoprotein D [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

Gene ID: 117011716, updated on 30-Mar-2024

Summary

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Gene symbol
APOD
Gene description
apolipoprotein D
See related
EnsemblRapid:ENSRFEG00010017214
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinolophus ferrumequinum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
Orthologs
human mouse all
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Genomic context

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See APOD in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) 2 NC_046285.1 (51699983..51715361)

Chromosome 2 - NC_046285.1Genomic Context describing neighboring genes Neighboring gene ferritin light chain-like Neighboring gene 3-hydroxybutyrate dehydrogenase 1 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 2 Neighboring gene uncharacterized LOC117014692 Neighboring gene transfer RNA valine (anticodon AAC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046285.1 Chromosome 2 Reference mRhiFer1_v1.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue regeneration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apolipoprotein D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRhiFer1_v1.p

Genomic

  1. NC_046285.1 Reference mRhiFer1_v1.p

    Range
    51699983..51715361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033087307.1 → XP_032943198.1  apolipoprotein D

    UniProtKB/TrEMBL
    A0A671FQC8
    Conserved Domains (1) summary
    cd19437
    Location:25 → 182
    lipocalin_apoD-like; apolipoprotein D and similar proteins

  2. XM_033087317.1 → XP_032943208.1  apolipoprotein D

    UniProtKB/TrEMBL
    A0A671FQC8
    Conserved Domains (1) summary
    cd19437
    Location:25 → 182
    lipocalin_apoD-like; apolipoprotein D and similar proteins

  3. XM_033087334.1 → XP_032943225.1  apolipoprotein D

    UniProtKB/TrEMBL
    A0A671FQC8
    Conserved Domains (1) summary
    cd19437
    Location:25 → 182
    lipocalin_apoD-like; apolipoprotein D and similar proteins

  4. XM_033087326.1 → XP_032943217.1  apolipoprotein D

    UniProtKB/TrEMBL
    A0A671FQC8
    Related
    ENSRFEP00010025909.2, ENSRFET00010028157.2
    Conserved Domains (1) summary
    cd19437
    Location:25 → 182
    lipocalin_apoD-like; apolipoprotein D and similar proteins
Nucleotide Protein
Heading Accession and Version

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