U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC116974154 homocysteine S-methyltransferase 1-like [ Amblyraja radiata (thorny skate) ]

Gene ID: 116974154, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC116974154
Gene description
homocysteine S-methyltransferase 1-like
See related
EnsemblRapid:ENSARAG00005005606
Gene type
protein coding
RefSeq status
MODEL
Organism
Amblyraja radiata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Amblyraja
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC116974154 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
100.20210331 current sAmbRad1.1.pri (GCF_010909765.2) 6 NC_045961.1 (25115807..25150596)

Chromosome 6 - NC_045961.1Genomic Context describing neighboring genes Neighboring gene protein-lysine methyltransferase METTL21C-like Neighboring gene putative methyltransferase-like protein 21E pseudogene Neighboring gene ERCC excision repair 5, endonuclease Neighboring gene basic, immunoglobulin-like variable motif containing Neighboring gene protein O-glucosyltransferase 2 Neighboring gene testis expressed 30

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045961.1 Chromosome 6 Reference sAmbRad1.1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-homocysteine S-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in S-methylmethionine cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in methionine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
homocysteine S-methyltransferase 1-like; homocysteine S-methyltransferase 2-like; homocysteine S-methyltransferase YbgG-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Amblyraja radiata Updated Annotation Release 100.20210331

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sAmbRad1.1.pri

Genomic

  1. NC_045961.1 Reference sAmbRad1.1.pri

    Range
    25115807..25150596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033022330.1 → XP_032878221.1  homocysteine S-methyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    PRK09485
    Location:3 → 309
    mmuM; homocysteine methyltransferase; Provisional

  2. XM_033022328.1 → XP_032878219.1  homocysteine S-methyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    PRK09485
    Location:3 → 309
    mmuM; homocysteine methyltransferase; Provisional

  3. XM_033022332.1 → XP_032878223.1  homocysteine S-methyltransferase 2-like isoform X3

    Conserved Domains (1) summary
    cl22882
    Location:3 → 239
    S-methyl_trans; Homocysteine S-methyltransferase

  4. XM_033022331.1 → XP_032878222.1  homocysteine S-methyltransferase YbgG-like isoform X2

    Related
    ENSARAP00005008211.1, ENSARAT00005008726.1
    Conserved Domains (1) summary
    PRK09485
    Location:7 → 288
    mmuM; homocysteine methyltransferase; Provisional

RNA

  1. XR_004412295.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases