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CHST3 carbohydrate sulfotransferase 3 [ Tyto alba (common barn owl) ]

Gene ID: 116961986, updated on 3-Aug-2024

Summary

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Gene symbol
CHST3
Gene description
carbohydrate sulfotransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See CHST3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881261.1 (37122973..37134044, complement)

NW_024881261.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116961988 Neighboring gene core histone macro-H2A.2 Neighboring gene AIF family member 2 Neighboring gene prosaposin Neighboring gene prosaposin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024881261 Unplaced Scaffold Reference T.alba_DEE_v4.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881261.1 Reference T.alba_DEE_v4.0

    Range
    37122973..37134044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042792170.1 → XP_042648104.1  carbohydrate sulfotransferase 3

  2. XM_042792183.1 → XP_042648117.1  carbohydrate sulfotransferase 3

  3. XM_042792177.1 → XP_042648111.1  carbohydrate sulfotransferase 3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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