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COG5 component of oligomeric golgi complex 5 [ Petromyzon marinus (sea lamprey) ]

Gene ID: 116951308, updated on 18-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
See related
EnsemblRapid:ENSPMAG00000016348
Gene type
protein coding
RefSeq status
MODEL
Organism
Petromyzon marinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: 42
Exon count:
22
Annotation release Status Assembly Chr Location
100 current kPetMar1.pri (GCF_010993605.1) 42 NC_046110.1 (11441667..11470402, complement)

Chromosome 42 - NC_046110.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase domain containing 1 Neighboring gene RNA pseudouridine synthase D3 Neighboring gene MAP7 domain-containing protein 1-like Neighboring gene sodium- and chloride-dependent creatine transporter 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046110.1 Chromosome 42 Reference kPetMar1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference kPetMar1.pri Primary Assembly

Genomic

  1. NC_046110.1 Reference kPetMar1.pri Primary Assembly

    Range
    11441667..11470402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032969850.1 → XP_032825741.1  conserved oligomeric Golgi complex subunit 5

    Related
    ENSPMAP00000012296.1, ENSPMAT00000085891.1
    Conserved Domains (2) summary
    pfam10392
    Location:41 → 163
    COG5; Golgi transport complex subunit 5
    TIGR02168
    Location:43 → 302
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
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