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WASHC4 WASH complex subunit 4 [ Petromyzon marinus (sea lamprey) ]

Gene ID: 116942316, updated on 1-Aug-2024

Summary

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Gene symbol
WASHC4
Gene description
WASH complex subunit 4
See related
EnsemblRapid:ENSPMAG00000002928
Gene type
protein coding
RefSeq status
MODEL
Organism
Petromyzon marinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
Orthologs
human mouse all
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Genomic context

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See WASHC4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
34
Annotation release Status Assembly Chr Location
100 current kPetMar1.pri (GCF_010993605.1) 14 NC_046082.1 (4643106..4746821, complement)

Chromosome 14 - NC_046082.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116942258 Neighboring gene oxytocin receptor-like Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene contactin-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046082.1 Chromosome 14 Reference kPetMar1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference kPetMar1.pri Primary Assembly

Genomic

  1. NC_046082.1 Reference kPetMar1.pri Primary Assembly

    Range
    4643106..4746821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032954049.1 → XP_032809940.1  WASH complex subunit 4

    UniProtKB/TrEMBL
    A0AAJ7T3W8
    Related
    ENSPMAP00000038998.1, ENSPMAT00000022434.1
    Conserved Domains (3) summary
    pfam14744
    Location:596 → 940
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:28 → 589
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:958 → 1126
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
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