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Alg1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase [ Daphnia magna ]

Gene ID: 116935751, updated on 3-Jul-2024

Summary

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Gene symbol
Alg1
Gene description
ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
See related
EnsemblRapid:LOC116935751
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See Alg1 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
9
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG2 NC_059183.1 (2659885..2662107)
100 previous assembly ASM399081v1 (GCF_003990815.1) Unplaced Scaffold NW_022656856.1 (1051..4188)

Linkage Group LG2 - NC_059183.1Genomic Context describing neighboring genes Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 2-like Neighboring gene uncharacterized LOC116916543 Neighboring gene uncharacterized LOC116935752 Neighboring gene mucin-12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate. Swart E, et al. Environ Pollut, 2019 Sep. PMID 31158668
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059183.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    2659885..2662107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045168915.1 → XP_045024850.1  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1

    Related
    XP_045024850.1, XM_045168915.1

  2. XM_045168916.1 → XP_045024851.1  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X2

    Related
    XP_045024851.1, XM_045168916.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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