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PIG-Z phosphatidylinositol glycan anchor biosynthesis class Z [ Daphnia magna ]

Gene ID: 116931702, updated on 6-Jul-2024

Summary

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Gene symbol
PIG-Z
Gene description
phosphatidylinositol glycan anchor biosynthesis class Z
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See PIG-Z in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
2
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG10 NC_059191.1 (9517071..9519096)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG10 NC_046183.1 (7918788..7920818)

Linkage Group LG10 - NC_059191.1Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase subunit S1 Neighboring gene uncharacterized LOC116931705 Neighboring gene centrosomal protein of 290 kDa Neighboring gene histone deacetylase 6 Neighboring gene serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: GPI mannosyltransferase 4
Names
GPI mannosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059191.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    9517071..9519096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032939320.2 → XP_032795211.2  LOW QUALITY PROTEIN: GPI mannosyltransferase 4

    UniProtKB/TrEMBL
    A0A0N8BET1
    Conserved Domains (1) summary
    cl21590
    Location:4 → 432
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Gene LinkOut

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