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LOC116930421 mitochondrial carnitine/acylcarnitine carrier protein [ Daphnia magna ]

Gene ID: 116930421, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116930421
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
See related
EnsemblRapid:LOC116930421
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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Genomic context

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See LOC116930421 in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
9
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG9 NC_059190.1 (3902749..3904712)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG9 NC_046182.1 (3734290..3736240)

Linkage Group LG9 - NC_059190.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116916225 Neighboring gene uncharacterized LOC116930424 Neighboring gene ADP-ribosylation factor-like protein 6-interacting protein 6 Neighboring gene RNA-binding protein 5 Neighboring gene Actin-related protein 2/3 complex, subunit 4 Neighboring gene extensin-2-like Neighboring gene plexin-B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059190.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    3902749..3904712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032937837.2 → XP_032793728.1  mitochondrial carnitine/acylcarnitine carrier protein

    UniProtKB/TrEMBL
    A0A0P5MYH6
    Related
    XP_032793728.1, XM_032937837.2
    Conserved Domains (1) summary
    pfam00153
    Location:104 → 196
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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