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LOC116929434 glycosyltransferase 25 family member [ Daphnia magna ]

Gene ID: 116929434, updated on 1-Jul-2024

Summary

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Gene symbol
LOC116929434
Gene description
glycosyltransferase 25 family member
See related
EnsemblRapid:LOC116929434
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See LOC116929434 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
10
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG8 NC_059189.1 (9466522..9484703)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG8 NC_046181.1 (8048497..8065214)

Linkage Group LG8 - NC_059189.1Genomic Context describing neighboring genes Neighboring gene dystrophin Neighboring gene uncharacterized LOC116929515 Neighboring gene cullin-5 Neighboring gene sorting nexin 3 Neighboring gene beta-3 adrenergic receptor Neighboring gene uncharacterized LOC116929459 Neighboring gene Adenylate kinase 1 Neighboring gene uncharacterized LOC116929419

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate. Swart E, et al. Environ Pollut, 2019 Sep. PMID 31158668

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase 25 family member
Names
Glycosyltransferase 25 domain containing 2 (GLT25D2), mRNA protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059189.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    9466522..9484703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032936672.2 → XP_032792563.1  glycosyltransferase 25 family member

    Related
    XP_032792563.1, XM_032936672.2
    Conserved Domains (2) summary
    cd06532
    Location:321 → 503
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
    cl11394
    Location:37 → 119
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases