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LOC116925998 glucoside xylosyltransferase 2 [ Daphnia magna ]

Gene ID: 116925998, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116925998
Gene description
glucoside xylosyltransferase 2
See related
EnsemblRapid:LOC116925998
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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Genomic context

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See LOC116925998 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
5
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG7 NC_059188.1 (13297177..13298849)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG7 NC_046180.1 (9782793..9784459)

Linkage Group LG7 - NC_059188.1Genomic Context describing neighboring genes Neighboring gene peptidylglycine alpha-hydroxylating monooxygenase Neighboring gene uncharacterized LOC116926000 Neighboring gene alpha-(1,3)-fucosyltransferase C Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 Neighboring gene lactosylceramide 4-alpha-galactosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate. Swart E, et al. Environ Pollut, 2019 Sep. PMID 31158668

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059188.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    13297177..13298849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032932760.2 → XP_032788651.2  glucoside xylosyltransferase 2 isoform X2

    Related
    XP_032788651.2, XM_032932760.2

  2. XM_032932759.2 → XP_032788650.2  glucoside xylosyltransferase 2 isoform X1

    Related
    XP_032788650.2, XM_032932759.2
Nucleotide Protein
Heading Accession and Version

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