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LOC116925995 lactosylceramide 4-alpha-galactosyltransferase [ Daphnia magna ]

Gene ID: 116925995, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116925995
Gene description
lactosylceramide 4-alpha-galactosyltransferase
See related
EnsemblRapid:LOC116925995
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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Genomic context

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See LOC116925995 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
1
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG7 NC_059188.1 (13303301..13304488, complement)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG7 NC_046180.1 (9787933..9789694, complement)

Linkage Group LG7 - NC_059188.1Genomic Context describing neighboring genes Neighboring gene glucoside xylosyltransferase 2 Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 Neighboring gene uncharacterized LOC116926004 Neighboring gene methyltransferase-like protein 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
putative Lactosylceramide

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059188.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    13303301..13304488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032932756.2 → XP_032788647.2  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A164VUU0
    Related
    XP_032788647.2, XM_032932756.2
    Conserved Domains (2) summary
    pfam04572
    Location:263 → 390
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:163 → 232
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

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