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LOC116922921 GDP-fucose protein O-fucosyltransferase 2 [ Daphnia magna ]

Gene ID: 116922921, updated on 1-Jul-2024

Summary

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Gene symbol
LOC116922921
Gene description
GDP-fucose protein O-fucosyltransferase 2
See related
EnsemblRapid:LOC116922921
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See LOC116922921 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG5 NC_059186.1 (7649558..7651443, complement)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG5 NC_046178.1 (5170252..5172128, complement)

Linkage Group LG5 - NC_059186.1Genomic Context describing neighboring genes Neighboring gene serine proteinase stubble Neighboring gene beta Hydroxy acid dehydrogenase 1 Neighboring gene signaling mucin HKR1 Neighboring gene mucin-12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate. Swart E, et al. Environ Pollut, 2019 Sep. PMID 31158668

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059186.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    7649558..7651443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032929403.2 → XP_032785294.2  GDP-fucose protein O-fucosyltransferase 2

    UniProtKB/TrEMBL
    A0A164YLQ4
    Related
    XP_032785294.2, XM_032929403.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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