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LOC116920953 lactosylceramide 4-alpha-galactosyltransferase [ Daphnia magna ]

Gene ID: 116920953, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116920953
Gene description
lactosylceramide 4-alpha-galactosyltransferase
See related
EnsemblRapid:LOC116920953
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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Genomic context

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See LOC116920953 in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
4
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG4 NC_059185.1 (2514699..2516728, complement)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG4 NC_046177.1 (702710..704730)

Linkage Group LG4 - NC_059185.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116920980 Neighboring gene uncharacterized LOC116920961 Neighboring gene N-acetylneuraminate 9-O-acetyltransferase Neighboring gene WSC domain-containing protein 1 Neighboring gene alpha-(1,3)-fucosyltransferase C Neighboring gene uncharacterized LOC116920975

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
Alpha1,3fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059185.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    2514699..2516728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032927139.2 → XP_032783030.2  lactosylceramide 4-alpha-galactosyltransferase

    Related
    XP_032783030.2, XM_032927139.2

  2. XM_032927138.2 → XP_032783029.2  lactosylceramide 4-alpha-galactosyltransferase

    Related
    XP_032783029.2, XM_032927138.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases