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CtBP C-terminal binding protein [ Daphnia magna ]

Gene ID: 116917691, updated on 10-Oct-2024

Summary

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Gene symbol
CtBP
Gene description
C-terminal binding protein
See related
EnsemblRapid:LOC116917691
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
Orthologs
fruit fly all
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Genomic context

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See CtBP in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
8
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG2 NC_059183.1 (16749028..16752215)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG2 NC_046175.1 (14247213..14250404)

Linkage Group LG2 - NC_059183.1Genomic Context describing neighboring genes Neighboring gene protein TRC8 homolog Neighboring gene E3 ubiquitin-protein transferase Katazuke Neighboring gene cell division cycle protein 16 Neighboring gene anoctamin-10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate. Swart E, et al. Environ Pollut, 2019 Sep. PMID 31158668

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein
Names
EOG090X05J1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059183.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    16749028..16752215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032923272.2 → XP_032779163.1  C-terminal-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A4Y7MG59, A0A4Y7MIC3
    Related
    XP_032779163.1, XM_032923272.2
    Conserved Domains (1) summary
    cd05299
    Location:30 → 348
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_032923269.2 → XP_032779160.1  C-terminal-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A4Y7MG59
    Related
    XP_032779160.1, XM_032923269.2
    Conserved Domains (1) summary
    cd05299
    Location:30 → 349
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_032923271.2 → XP_032779162.1  C-terminal-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A0P5E3C9, A0A4Y7MG59
    Related
    XP_032779162.1, XM_032923271.2
    Conserved Domains (1) summary
    cd05299
    Location:30 → 348
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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