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LOC116915423 beta-1,3-galactosyltransferase 1 [ Daphnia magna ]

Gene ID: 116915423, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116915423
Gene description
beta-1,3-galactosyltransferase 1
See related
EnsemblRapid:LOC116915423
Gene type
protein coding
RefSeq status
MODEL
Organism
Daphnia magna
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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Genomic context

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See LOC116915423 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM2063170v1.1 (GCF_020631705.1) LG2 NC_059183.1 (5781319..5784465)
100 previous assembly ASM399081v1 (GCF_003990815.1) LG2 NC_046175.1 (1150874..1153848, complement)

Linkage Group LG2 - NC_059183.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116915468 Neighboring gene RNA guanine-N7 methyltransferase activating subunit-like Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene serine protease filzig Neighboring gene retinol dehydrogenase 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Species-specific transcriptomic responses in Daphnia magna exposed to a bio-plastic production intermediate. Swart E, et al. Environ Pollut, 2019 Sep. PMID 31158668

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2063170v1.1 Primary Assembly

Genomic

  1. NC_059183.1 Reference ASM2063170v1.1 Primary Assembly

    Range
    5781319..5784465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032920554.2 → XP_032776445.2  beta-1,3-galactosyltransferase 1 isoform X1

    Related
    XP_032776445.2, XM_032920554.2

  2. XM_032920556.2 → XP_032776447.2  beta-1,3-galactosyltransferase 1 isoform X2

    Related
    XP_032776447.2, XM_032920556.2

  3. XM_032920553.2 → XP_032776444.2  beta-1,3-galactosyltransferase 1 isoform X1

    Related
    XP_032776444.2, XM_032920553.2
Nucleotide Protein
Heading Accession and Version

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