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AGTRAP angiotensin II receptor associated protein [ Lontra canadensis (Northern American river otter) ]

Gene ID: 116871059, updated on 18-Mar-2024

Summary

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Gene symbol
AGTRAP
Gene description
angiotensin II receptor associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Lontra canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra
Orthologs
human mouse all
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Genomic context

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See AGTRAP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current GSC_riverotter_1.0 (GCF_010015895.1) Unplaced Scaffold NW_022631019.1 (8241529..8253838)

NW_022631019.1Genomic Context describing neighboring genes Neighboring gene dorsal inhibitory axon guidance protein Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene chromosome unknown C1orf167 homolog Neighboring gene methylenetetrahydrofolate reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022631019 Unplaced Scaffold Reference GSC_riverotter_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in angiotensin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of blood pressure IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type-1 angiotensin II receptor-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lontra canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_riverotter_1.0

Genomic

  1. NW_022631019.1 Reference GSC_riverotter_1.0

    Range
    8241529..8253838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032863412.1 → XP_032719303.1  type-1 angiotensin II receptor-associated protein isoform X2

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 152
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  2. XM_032863415.1 → XP_032719306.1  type-1 angiotensin II receptor-associated protein isoform X4

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 145
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  3. XM_032863411.1 → XP_032719302.1  type-1 angiotensin II receptor-associated protein isoform X1

    Conserved Domains (1) summary
    cl05741
    Location:9 → 56
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  4. XM_032863413.1 → XP_032719304.1  type-1 angiotensin II receptor-associated protein isoform X3

    Conserved Domains (1) summary
    cl05741
    Location:9 → 56
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)
Nucleotide Protein
Heading Accession and Version

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