U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TJP2 tight junction protein 2 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116837457, updated on 18-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TJP2
Gene description
tight junction protein 2
See related
Ensembl:ENSCABG00000022466
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TJP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022645477.1 (3101676..3198523)

NW_022645477.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene U2 spliceosomal RNA Neighboring gene frataxin Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene amyloid beta precursor protein binding family A member 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022645477 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022645477.1 Reference ASM359739v1

    Range
    3101676..3198523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032801838.1 → XP_032657729.1  tight junction protein ZO-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JDI0
    Related
    ENSCABP00000030727.1, ENSCABT00000033680.1
    Conserved Domains (5) summary
    cd12027
    Location:595 → 657
    SH3_ZO-2; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 2
    smart00072
    Location:691 → 870
    GuKc; Guanylate kinase homologues
    smart00228
    Location:293 → 373
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR01622
    Location:134 → 270
    SF-CC1; splicing factor, CC1-like family

  2. XM_032801839.1 → XP_032657730.1  tight junction protein ZO-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JDI0
    Conserved Domains (5) summary
    cd12027
    Location:595 → 657
    SH3_ZO-2; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 2
    smart00072
    Location:691 → 870
    GuKc; Guanylate kinase homologues
    smart00228
    Location:293 → 373
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR01622
    Location:134 → 270
    SF-CC1; splicing factor, CC1-like family

  3. XM_032801835.1 → XP_032657726.1  tight junction protein ZO-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JDI0
    Related
    ENSCABP00000030729.1, ENSCABT00000033682.1
    Conserved Domains (5) summary
    cd12027
    Location:595 → 657
    SH3_ZO-2; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 2
    smart00072
    Location:691 → 870
    GuKc; Guanylate kinase homologues
    smart00228
    Location:293 → 373
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR01622
    Location:134 → 270
    SF-CC1; splicing factor, CC1-like family

  4. XM_032801837.1 → XP_032657728.1  tight junction protein ZO-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JDI0
    Conserved Domains (5) summary
    cd12027
    Location:595 → 657
    SH3_ZO-2; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 2
    smart00072
    Location:691 → 870
    GuKc; Guanylate kinase homologues
    smart00228
    Location:293 → 373
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR01622
    Location:134 → 270
    SF-CC1; splicing factor, CC1-like family

  5. XM_032801836.1 → XP_032657727.1  tight junction protein ZO-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JDI0
    Conserved Domains (5) summary
    cd12027
    Location:595 → 657
    SH3_ZO-2; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 2
    smart00072
    Location:691 → 870
    GuKc; Guanylate kinase homologues
    smart00228
    Location:293 → 373
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR01622
    Location:134 → 270
    SF-CC1; splicing factor, CC1-like family

  6. XM_032801834.1 → XP_032657725.1  tight junction protein ZO-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JDI0
    Conserved Domains (5) summary
    cd12027
    Location:619 → 681
    SH3_ZO-2; Src homology 3 domain of the Tight junction protein, Zonula occludens protein 2
    smart00072
    Location:715 → 894
    GuKc; Guanylate kinase homologues
    smart00228
    Location:317 → 397
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:33 → 118
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR01622
    Location:158 → 294
    SF-CC1; splicing factor, CC1-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.