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HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116835085, updated on 18-Mar-2024

Summary

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Gene symbol
HACD4
Gene description
3-hydroxyacyl-CoA dehydratase 4
See related
Ensembl:ENSCABG00000015661
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See HACD4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022644354.1 (240169..267546)

NW_022644354.1Genomic Context describing neighboring genes Neighboring gene interferon epsilon-like Neighboring gene interferon kappa-like Neighboring gene focadhesin Neighboring gene MLLT3 super elongation complex subunit Neighboring gene uncharacterized LOC116835080

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022644354 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022644354.1 Reference ASM359739v1

    Range
    240169..267546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032797575.1 → XP_032653466.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C0HFQ4
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 211
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_032797573.1 → XP_032653464.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C0HFQ4
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 211
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  3. XM_032797572.1 → XP_032653463.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C0HFQ4
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 211
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  4. XM_032797574.1 → XP_032653465.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C0HFQ4
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 211
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  5. XM_032797576.1 → XP_032653467.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

    UniProtKB/TrEMBL
    A0A8C0HFQ4
    Related
    ENSCABP00000021252.1, ENSCABT00000023278.1
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 211
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
Heading Accession and Version

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