U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116822229, updated on 18-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See A4GALT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022641491.1 (367426..471517, complement)

NW_022641491.1Genomic Context describing neighboring genes Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene RAB15 effector protein Neighboring gene poly(U)-specific endoribonuclease-A-like Neighboring gene uncharacterized LOC116822231

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022641491 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022641491.1 Reference ASM359739v1

    Range
    367426..471517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032775939.1 → XP_032631830.1  lactosylceramide 4-alpha-galactosyltransferase isoform X2

    Conserved Domains (2) summary
    pfam04488
    Location:117 → 230
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:253 → 375
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  2. XM_032775943.1 → XP_032631834.1  lactosylceramide 4-alpha-galactosyltransferase isoform X3

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  3. XM_032775942.1 → XP_032631833.1  lactosylceramide 4-alpha-galactosyltransferase isoform X3

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  4. XM_032775941.1 → XP_032631832.1  lactosylceramide 4-alpha-galactosyltransferase isoform X3

    Conserved Domains (2) summary
    pfam04488
    Location:95 → 208
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  5. XM_032775940.1 → XP_032631831.1  lactosylceramide 4-alpha-galactosyltransferase isoform X2

    Conserved Domains (2) summary
    pfam04488
    Location:117 → 230
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:253 → 375
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  6. XM_032775936.1 → XP_032631827.1  lactosylceramide 4-alpha-galactosyltransferase isoform X1

    Conserved Domains (2) summary
    pfam04488
    Location:158 → 271
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:294 → 416
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  7. XM_032775937.1 → XP_032631828.1  lactosylceramide 4-alpha-galactosyltransferase isoform X2

    Conserved Domains (2) summary
    pfam04488
    Location:117 → 230
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:253 → 375
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

RNA

  1. XR_004373105.1 RNA Sequence

  2. XR_004373106.1 RNA Sequence

  3. XR_004373107.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.