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H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116821947, updated on 18-Mar-2024

Summary

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Gene symbol
H6PD
Gene description
hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase
See related
Ensembl:ENSCABG00000017652
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See H6PD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022641466.1 (4787422..4807640, complement)

NW_022641466.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 33 Neighboring gene U1 spliceosomal RNA Neighboring gene splA/ryanodine receptor domain and SOCS box containing 1 Neighboring gene uncharacterized LOC116821951 Neighboring gene G protein-coupled receptor 157 Neighboring gene solute carrier family 2, facilitated glucose transporter member 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022641466 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphogluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucose-6-phosphate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDH/6PGL endoplasmic bifunctional protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022641466.1 Reference ASM359739v1

    Range
    4787422..4807640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032775484.1 → XP_032631375.1  GDH/6PGL endoplasmic bifunctional protein

    UniProtKB/TrEMBL
    A0A8C0IXY3
    Conserved Domains (2) summary
    COG0364
    Location:23 → 505
    Zwf; Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
    cl00339
    Location:555 → 787
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  2. XM_032775486.1 → XP_032631377.1  GDH/6PGL endoplasmic bifunctional protein

    UniProtKB/TrEMBL
    A0A8C0IXY3
    Related
    ENSCABP00000023973.1, ENSCABT00000026262.1
    Conserved Domains (2) summary
    COG0364
    Location:23 → 505
    Zwf; Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
    cl00339
    Location:555 → 787
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  3. XM_032775485.1 → XP_032631376.1  GDH/6PGL endoplasmic bifunctional protein

    UniProtKB/TrEMBL
    A0A8C0IXY3
    Conserved Domains (2) summary
    COG0364
    Location:23 → 505
    Zwf; Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
    cl00339
    Location:555 → 787
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
Nucleotide Protein
Heading Accession and Version

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