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EBP EBP cholestenol delta-isomerase [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116818888, updated on 18-Mar-2024

Summary

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Gene symbol
EBP
Gene description
EBP cholestenol delta-isomerase
See related
Ensembl:ENSCABG00000016236
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See EBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022650028.1 (454678..460340)

NW_022650028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116818900 Neighboring gene organic solute transporter subunit alpha-like Neighboring gene porcupine O-acyltransferase Neighboring gene TBC1 domain family member 25 Neighboring gene solute carrier family 38 member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022650028 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-8 sterol isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholestenol delta-isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid delta-isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022650028.1 Reference ASM359739v1

    Range
    454678..460340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032770167.1 → XP_032626058.1  3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

    UniProtKB/TrEMBL
    A0A8C0HH45
    Related
    ENSCABP00000022044.1, ENSCABT00000024153.1
    Conserved Domains (1) summary
    pfam05241
    Location:101 → 212
    EBP; Emopamil binding protein

  2. XM_032770168.1 → XP_032626059.1  3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

    UniProtKB/TrEMBL
    A0A8C0HH45
    Conserved Domains (1) summary
    pfam05241
    Location:101 → 212
    EBP; Emopamil binding protein
Nucleotide Protein
Heading Accession and Version

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