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AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116817406, updated on 18-Mar-2024

Summary

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Gene symbol
AGPAT2
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 2
See related
Ensembl:ENSCABG00000004473
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See AGPAT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022648807.1 (5056584..5079954, complement)

NW_022648807.1Genomic Context describing neighboring genes Neighboring gene notch receptor 1 Neighboring gene histone H2A.J-like Neighboring gene EGF like domain multiple 7 Neighboring gene uncharacterized LOC116817503 Neighboring gene divergent protein kinase domain 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022648807 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022648807.1 Reference ASM359739v1

    Range
    5056584..5079954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032767471.1 → XP_032623362.1  1-acyl-sn-glycerol-3-phosphate acyltransferase beta isoform X1

    UniProtKB/TrEMBL
    A0A8C0GA36
    Related
    ENSCABP00000005947.1, ENSCABT00000006475.1
    Conserved Domains (1) summary
    cd07989
    Location:73 → 255
    LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like

  2. XM_032767472.1 → XP_032623363.1  1-acyl-sn-glycerol-3-phosphate acyltransferase beta isoform X2

    Conserved Domains (1) summary
    cd07989
    Location:73 → 227
    LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
Nucleotide Protein
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