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CDK7 cyclin dependent kinase 7 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116816063, updated on 18-Mar-2024

Summary

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Gene symbol
CDK7
Gene description
cyclin dependent kinase 7
See related
Ensembl:ENSCABG00000020808
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See CDK7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022647917.1 (799043..833686, complement)

NW_022647917.1Genomic Context describing neighboring genes Neighboring gene thrombospondin 4 Neighboring gene serine incorporator 5 Neighboring gene uncharacterized LOC116816072 Neighboring gene alpha-ketoglutarate dehydrogenase subunit 4 Neighboring gene centromere protein H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022647917 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022647917.1 Reference ASM359739v1

    Range
    799043..833686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032765000.1 → XP_032620891.1  cyclin-dependent kinase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0J8F1
    Related
    ENSCABP00000028322.1, ENSCABT00000031033.1
    Conserved Domains (1) summary
    cd07841
    Location:9 → 306
    STKc_CDK7; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

  2. XM_032765003.1 → XP_032620894.1  cyclin-dependent kinase 7 isoform X2

    Conserved Domains (1) summary
    cl21453
    Location:1 → 215
    PKc_like; Protein Kinases, catalytic domain

  3. XM_032765002.1 → XP_032620893.1  cyclin-dependent kinase 7 isoform X2

    Conserved Domains (1) summary
    cl21453
    Location:1 → 215
    PKc_like; Protein Kinases, catalytic domain

  4. XM_032765004.1 → XP_032620895.1  cyclin-dependent kinase 7 isoform X2

    Conserved Domains (1) summary
    cl21453
    Location:1 → 215
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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