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shams glucoside xylosyltransferase 1 shams [ Drosophila grimshawi ]

Gene ID: 116806046, updated on 22-May-2024

Summary

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Gene symbol
shams
Gene description
glucoside xylosyltransferase 1 shams
See related
EnsemblRapid:LOC116806046
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Orthologs
fruit fly all
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Genomic context

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See shams in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062646.1 (131785..134124)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961684.1 (373389..375728)

NW_025062646.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 G1 Neighboring gene programmed cell death protein 6 Neighboring gene uncharacterized LOC6570025 Neighboring gene L27 and PDZ_signaling domain-containing protein veli

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 2; uncharacterized protein LOC116806046

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062646.1 Reference ASM1815329v1

    Range
    131785..134124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032741833.1 → XP_032597724.1  uncharacterized protein LOC116806046 isoform X3

    Related
    XP_032597724.1, XM_032741833.1
    Conserved Domains (1) summary
    cl11394
    Location:48 → 70
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_032741832.1 → XP_032597723.1  glucoside xylosyltransferase 2 isoform X2

    Related
    XP_032597723.1, XM_032741832.1
    Conserved Domains (1) summary
    cl11394
    Location:2 → 221
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_032741831.1 → XP_032597722.1  glucoside xylosyltransferase 2 isoform X1

    Related
    XP_032597722.1, XM_032741831.1
    Conserved Domains (1) summary
    cl11394
    Location:48 → 343
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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