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RASSF3 Ras association domain family member 3 [ Chiroxiphia lanceolata (lance-tailed manakin) ]

Gene ID: 116787499, updated on 3-Aug-2024

Summary

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Gene symbol
RASSF3
Gene description
Ras association domain family member 3
See related
EnsemblRapid:ENSCLNG00000001113
Gene type
protein coding
RefSeq status
MODEL
Organism
Chiroxiphia lanceolata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
Orthologs
human mouse all
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Genomic context

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See RASSF3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
100 current bChiLan1.pri (GCF_009829145.1) 5 NC_045641.1 (33959150..34069973)

Chromosome 5 - NC_045641.1Genomic Context describing neighboring genes Neighboring gene exportin for tRNA Neighboring gene TANK binding kinase 1 Neighboring gene glucosamine (N-acetyl)-6-sulfatase Neighboring gene TBC1 domain family member 30

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045641.1 Chromosome 5 Reference bChiLan1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras association domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bChiLan1.pri

Genomic

  1. NC_045641.1 Reference bChiLan1.pri

    Range
    33959150..34069973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032689165.1 → XP_032545056.1  ras association domain-containing protein 3 isoform X6

    Conserved Domains (2) summary
    cd17219
    Location:32 → 176
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:186 → 224
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain

  2. XM_032689164.1 → XP_032545055.1  ras association domain-containing protein 3 isoform X6

    Conserved Domains (2) summary
    cd17219
    Location:32 → 176
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:186 → 224
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain

  3. XM_032689159.1 → XP_032545050.1  ras association domain-containing protein 3 isoform X1

    Related
    ENSCLNP00000001520.1, ENSCLNT00000001608.1
    Conserved Domains (3) summary
    cd17219
    Location:96 → 240
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:250 → 288
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
    cl00040
    Location:40 → 59
    C1; protein kinase C conserved region 1 (C1 domain) superfamily

  4. XM_032689160.1 → XP_032545051.1  ras association domain-containing protein 3 isoform X2

    Conserved Domains (3) summary
    cd17219
    Location:68 → 212
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:222 → 260
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
    cl00040
    Location:12 → 31
    C1; protein kinase C conserved region 1 (C1 domain) superfamily

  5. XM_032689163.1 → XP_032545054.1  ras association domain-containing protein 3 isoform X5

    Conserved Domains (2) summary
    cd17219
    Location:40 → 184
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:194 → 232
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain

  6. XM_032689162.1 → XP_032545053.1  ras association domain-containing protein 3 isoform X4

    Related
    ENSCLNP00000001527.1, ENSCLNT00000001616.1
    Conserved Domains (2) summary
    cd17219
    Location:57 → 201
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:211 → 249
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain

  7. XM_032689161.1 → XP_032545052.1  ras association domain-containing protein 3 isoform X3

    Conserved Domains (2) summary
    cd17219
    Location:61 → 205
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:215 → 253
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain

  8. XM_032689166.1 → XP_032545057.1  ras association domain-containing protein 3 isoform X7

    Conserved Domains (2) summary
    cd17219
    Location:20 → 164
    RA_RASSF3; Ras-associating (RA) domain found in Ras-association domain-containing protein 3 (RASSF3)
    pfam16517
    Location:174 → 212
    Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
Nucleotide Protein
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