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CHMP3 charged multivesicular body protein 3 [ Phocoena sinus (vaquita) ]

Gene ID: 116764156, updated on 18-Mar-2024

Summary

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Gene symbol
CHMP3
Gene description
charged multivesicular body protein 3
See related
Ensembl:ENSPSNG00000009996
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See CHMP3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 13 NC_045775.1 (77059288..77140029, complement)

Chromosome 13 - NC_045775.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L35 Neighboring gene receptor accessory protein 1 Neighboring gene lysine demethylase 3A Neighboring gene U6 spliceosomal RNA Neighboring gene UPF0729 protein C18orf32 homolog Neighboring gene ring finger protein 103 Neighboring gene uncharacterized LOC116763877 Neighboring gene high mobility group protein B1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045775.1 Chromosome 13 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045775.1 Reference mPhoSin1.pri

    Range
    77059288..77140029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032652462.1 → XP_032508353.1  charged multivesicular body protein 3

    Related
    ENSPSNP00000013571.1, ENSPSNT00000015345.1
    Conserved Domains (1) summary
    pfam03357
    Location:71 → 240
    Snf7
Nucleotide Protein
Heading Accession and Version

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