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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Phocoena sinus (vaquita) ]

Gene ID: 116763491, updated on 18-Mar-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
See related
Ensembl:ENSPSNG00000008454
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 12 NC_045774.1 (45623052..45909259)

Chromosome 12 - NC_045774.1Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene collagen type X alpha 1 chain Neighboring gene fyn related Src family tyrosine kinase Neighboring gene coiled-coil domain-containing protein 167-like Neighboring gene sentrin-specific protease 2-like Neighboring gene histone deacetylase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045774.1 Chromosome 12 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045774.1 Reference mPhoSin1.pri

    Range
    45623052..45909259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032651290.1 → XP_032507181.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A8C9BTP5
    Related
    ENSPSNP00000011405.1, ENSPSNT00000012925.1
    Conserved Domains (1) summary
    pfam00685
    Location:89 → 329
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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