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LOC116762407 histone H2A type 1-like [ Phocoena sinus (vaquita) ]

Gene ID: 116762407, updated on 9-Nov-2023

Summary

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Gene symbol
LOC116762407
Gene description
histone H2A type 1-like
See related
Ensembl:ENSPSNG00000019354
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
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Genomic context

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See LOC116762407 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 11 NC_045773.1 (82265104..82265801, complement)

Chromosome 11 - NC_045773.1Genomic Context describing neighboring genes Neighboring gene histone H3.1 Neighboring gene uncharacterized LOC116762381 Neighboring gene histone H2B type 1-L Neighboring gene H1.5 linker histone, cluster member Neighboring gene histone H2B type 1-N

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045773.1 Chromosome 11 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A type 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045773.1 Reference mPhoSin1.pri

    Range
    82265104..82265801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032649325.1 → XP_032505216.1  histone H2A type 1-like

    UniProtKB/TrEMBL
    A0A8C9BAM8, A0A8C9CKI3
    Related
    ENSPSNP00000026558.1, ENSPSNT00000029844.1
    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional
Nucleotide Protein
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