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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Phocoena sinus (vaquita) ]

Gene ID: 116757488, updated on 18-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
See related
Ensembl:ENSPSNG00000010533
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 8 NC_045770.1 (6910247..7450391)

Chromosome 8 - NC_045770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116757413 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene ETS proto-oncogene 1, transcription factor Neighboring gene uncharacterized LOC116757490 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045770.1 Chromosome 8 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045770.1 Reference mPhoSin1.pri

    Range
    6910247..7450391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032639118.1 → XP_032495009.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C9C0U2
    Related
    ENSPSNP00000014732.1, ENSPSNT00000016637.1
    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain

  2. XM_032639117.1 → XP_032495008.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C9BZG9
    Related
    ENSPSNP00000014706.1, ENSPSNT00000016608.1
    Conserved Domains (4) summary
    cd00096
    Location:343 → 347
    Ig; Ig strand A' [structural motif]
    cd05759
    Location:149 → 246
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:418 → 515
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:335 → 416
    Ig; Immunoglobulin domain
Nucleotide Protein
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