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PDE9A phosphodiesterase 9A [ Phocoena sinus (vaquita) ]

Gene ID: 116753648, updated on 18-Mar-2024

Summary

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Gene symbol
PDE9A
Gene description
phosphodiesterase 9A
See related
Ensembl:ENSPSNG00000005243
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See PDE9A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 4 NC_045766.1 (142934599..143034492)

Chromosome 4 - NC_045766.1Genomic Context describing neighboring genes Neighboring gene radial spoke head component 1 Neighboring gene solute carrier family 37 member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene WD repeat domain 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045766.1 Chromosome 4 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045766.1 Reference mPhoSin1.pri

    Range
    142934599..143034492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032631630.1 → XP_032487521.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    UniProtKB/TrEMBL
    A0A8C9BSQ3
    Related
    ENSPSNP00000007833.1, ENSPSNT00000008879.1
    Conserved Domains (1) summary
    pfam00233
    Location:251 → 479
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_032631631.1 → XP_032487522.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    UniProtKB/TrEMBL
    A0A8C9BSQ3
    Conserved Domains (1) summary
    pfam00233
    Location:251 → 479
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_032631633.1 → XP_032487524.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

    UniProtKB/TrEMBL
    A0A8C9BSQ3
    Conserved Domains (1) summary
    pfam00233
    Location:240 → 456
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_032631632.1 → XP_032487523.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

    UniProtKB/TrEMBL
    A0A8C9BSQ3
    Conserved Domains (1) summary
    pfam00233
    Location:232 → 460
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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