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SI sucrase-isomaltase [ Phocoena sinus (vaquita) ]

Gene ID: 116753068, updated on 18-Mar-2024

Summary

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Gene symbol
SI
Gene description
sucrase-isomaltase
See related
Ensembl:ENSPSNG00000001571
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
47
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 4 NC_045766.1 (43807706..43906633, complement)

Chromosome 4 - NC_045766.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene protein FAM104A-like Neighboring gene U6 spliceosomal RNA Neighboring gene SLIT and NTRK like family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045766.1 Chromosome 4 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrase-isomaltase, intestinal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045766.1 Reference mPhoSin1.pri

    Range
    43807706..43906633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032630533.1 → XP_032486424.1  sucrase-isomaltase, intestinal

    UniProtKB/TrEMBL
    A0A8C9DWM2
    Related
    ENSPSNP00000002078.1, ENSPSNT00000002418.1
    Conserved Domains (5) summary
    smart00018
    Location:934 → 980
    PD; P or trefoil or TFF domain
    cd06602
    Location:343 → 707
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 343
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam00088
    Location:63 → 108
    Trefoil; Trefoil (P-type) domain
    pfam16863
    Location:125 → 233
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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